CDS

Accession Number TCMCG010C08762
gbkey CDS
Protein Id XP_016561486.1
Location join(160935488..160936159,160936793..160937300,160937374..160937504,160937628..160937933,160942930..160943086,160943160..160943452,160944644..160944703,160944806..160944958,160945520..160945789,160945876..160946107,160946511..160946641,160946730..160946954)
Gene LOC107860599
GeneID 107860599
Organism Capsicum annuum

Protein

Length 1045aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA319678
db_source XM_016706000.1
Definition PREDICTED: CRM-domain containing factor CFM2, chloroplastic isoform X1 [Capsicum annuum]

EGGNOG-MAPPER Annotation

COG_category L
Description Chloroplastic group IIA intron splicing facilitator CRS1
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0000372        [VIEW IN EMBL-EBI]
GO:0000373        [VIEW IN EMBL-EBI]
GO:0000375        [VIEW IN EMBL-EBI]
GO:0000376        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009532        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTTGCTTCCTTTCTGCAACTTCCATCCCTTAAACCCTTCTAAAACCCTCTTAACAAACCCTTCACCCTCTCTTTCCATGCAACCCTTCACCGTTTTTGCCACTTCCCCTAATACTGAAGCTGCTTTACCTGAATCCGCCATTAAAAGAATCTCAGAAAAACTCCGTAGCCTCGGCTTTGTTCAAGAACCCCAAGTTCAAGAAACCCCACAAAGTTCTTTCGGTCCAAACCCCACTGTTAACTCACCTGGTCAAATTTTTGTTCCTTTGCCTGCTCAATTACCCAAGCACCGTGTGGGTCATACGCTTGATACCAGCTGGAGTACACCCGAAAACCCGGTACCACAGCCTGGTTTAGGGGAGTCTATACAGAAGTTTCATGAACTGAGGGATGGGTTCTTGAAGGAGAAGGAGAAGGAGAGGTTGAGGAATAAGGAGGAGAAGAAAGAGAGAGCGCCGAGTTTAGCCGAGCTGACATTGAAAGCTGAGGAATTGAGTAGGTTGAGGACAATTGGAATTGCGATAAGGAAAAAGTTGAAGATTGGTAAAGCTGGAATTACTGAGGGGATTGTGAATGGTATTCATGAAAGATGGAGGCGTACCGAGCTTGTTAAGATTACGTGTGAGGATATATGTAGGTTGAATATGAAGAGGACTCATGAATTGTTAGAGAAAAAAACTGGAGGTTTGGTTATCTGGAGGTCTGGAAGTAATATAATTTTGTATAGAGGAGCTGATTACAAGTATCCATATTTCTCTGGAAGTAGCTTCGAGAATAATAGTGCGCAAGATGCTACTCCTGACTTGTTCACGGGTGCGGAAGAGCATATGAGTAACTCATCTGGCATGGATGCGGTAAAATCTGATGCATTGGACAGAAAATCTTCTCCACGTGTAATCCAGGGTGTAGGTTCTCCAGACAGAGTTCGATTTGAATTGCCTGGAGAGGCAGCGCATACTGAAGAAGCAGACAAGTTGCTGGAAGGACTTGGCCCTCGCTTTACTGATTGGTGGGGTTGTGAGCCATTGCCTATCGATGCAGATCTTTTGCCAGCTATAGTCCCCGGGTACAAGAAACCTTTCCGTCTACTTCCATATGGAGTGAAGCCTAAATTGACAAATGATGAAATGACAACACTGAGGAGACTTGGTCGACCTTTGCCTTGTCATTTTGCATTAGGTAGAAACAGAAAACTCCAAGGATTGGCTGCTGCAATTGTGAAGCTTTGGGAGAAATGTGAAATTGTAAAAGTTGCCGTTAAGAGAGGAGTTCAGAACACTAACAGTGAACTGATGGCGGAAGAGCTTAAGTGGCTGACTGGAGGAACCTTGCTCTCTAGGGATAGGGAATTTATTGTCTTCTACCGTGGGAAGGACTTCCTTCCCTCTGCAGTCTCTTCAGCAATAGAAGAACGAAGAAAGCAAATCATTGAAGAGGAAAAGAGGAGTGGTATTAATTCATCAGTAGCAAATGCTAAGGAAAGGAAACAATCCGCAACGGGAAGTGTTTCTGATGATGGACATGCCAACAGAAATAACCAGAAAGCTGACCTAGAAAAAAAGAAACTTACTTCCATGGAAGCTGCCATCAAGAGAACTGTAGATAAATTAACCACTGCATTGGAAAAGAAAGCCGAGGCAGAGAAGCTCCTTCTGGAGCTTGAGGAGGATGAGGTGCCACAACAATCTGATATGGATAAAGAGGGAATAACTGAAGAAGAAAGATACATGTTGAGGAAGATTGGCTTGAGAATGAAGCCTTTCTTACTTCTTGGTAGGCGAGGAGTCTTTGATGGAACAGTCGAGAACATGCACCTTCATTGGAAGTATAGGGAATTGGTAAAGGTAATAACCGGGATGAAAAATATTGAAGAGGTCCACCAAATTGCTAGGATGTTGGAAGCAGAAAGTGGGGGAATACTAGTTGCCATTGAGAGAGTTAATAAGGGTTATGCGATCATTGTTTACCGAGGAAAGAACTATGAAAGGCCTGCTTCTTTGAGGCCTCAGACTCTTCTAAGTAAAAGAGAAGCAATGAAGCGCTCTATCGAGGCTCAGCGACGTCAGTCGCTGAAATTACATGTCTTAAAGCTTACGCAAAATATAGAGGCTTTGAAGTCACGGTTGGCCAAAAATGAGGAGATGATTCATATTCAATCCCCGGATATAGTTGATAAGCAAGTACCTGTGACGGGACTATCTGATGCTGCACGCGGAACTAACTACCAGCCTAGTTTAGCAAGTCCCTGCACTTCTGAGGTGAAAATGAATGCATTTGTGGATTCCGAGGATGTTGCAGAAGACACTGACCCCAATTGTCCAAACGAATTACCAAGTGATTCCTCGGACACTGACCACAGTTCTCGGCAAGATATTCCAAGTGATTCTTCTTTCCAATATGAGAGCAAGGCTGCGGCTATGTATGATACAACTCAACCTCAACATCAATCCATTTCATCAACCAAAGAATCAAAAAGTATGTTCAATGTGAATGTGGACAAAAAAGTATTTGGAAGTGCAGTGGGTGAATTTGTTTCCACGTCTTTCAAGGAAGAAGTTAAGATCCACTTTTCCGAGACCAAAAGTTTCAGCAAACCTCAGGAAGTTGACAATAAAAAAGAGGTCTCTCAAGTTGATTCTGTAAAACCGCAACAAGAACTTAGATCCACCCGGAGTAGGTCCGAAGGGATGTCTCCCAAAAAAATACAACTTTCCAATAGGGAGAGGCTGCTTCTCAGAAAACAAGCCCTCAAGATGAAGAAGCAACCAGTGCTTGCTGTTGGGAGGAGCAATATTGTTACCGGAGTTGCCAAAAATATCAAAGAACACTTCAAGAAGTATCCTCTTGCGATTGTGAATGTCAAAGGGCGGGCAAAAGGGACTTCAGTTAGGGAGGTGGTTTTTAAGCTGGAGCAAGCTACAGGTGCTGTTCTTGTTTCTCAAGAACCAAGCAAAGTCATATTGTATAGAGGTTGGGGAGCAGGTGAAGAGCGCGCTTCTTCTAATGGTAATGGCACCAGGGATTCGAGAAACATCAGAGAGCACAAGGAACTGCTGGCAATATCTCCTGAACTATTTTCAGCAATCAGGCTTGAATGTGGTTTACAATCTGACAATGAAATGGAGGTTGCTTCATAG
Protein:  
MLLPFCNFHPLNPSKTLLTNPSPSLSMQPFTVFATSPNTEAALPESAIKRISEKLRSLGFVQEPQVQETPQSSFGPNPTVNSPGQIFVPLPAQLPKHRVGHTLDTSWSTPENPVPQPGLGESIQKFHELRDGFLKEKEKERLRNKEEKKERAPSLAELTLKAEELSRLRTIGIAIRKKLKIGKAGITEGIVNGIHERWRRTELVKITCEDICRLNMKRTHELLEKKTGGLVIWRSGSNIILYRGADYKYPYFSGSSFENNSAQDATPDLFTGAEEHMSNSSGMDAVKSDALDRKSSPRVIQGVGSPDRVRFELPGEAAHTEEADKLLEGLGPRFTDWWGCEPLPIDADLLPAIVPGYKKPFRLLPYGVKPKLTNDEMTTLRRLGRPLPCHFALGRNRKLQGLAAAIVKLWEKCEIVKVAVKRGVQNTNSELMAEELKWLTGGTLLSRDREFIVFYRGKDFLPSAVSSAIEERRKQIIEEEKRSGINSSVANAKERKQSATGSVSDDGHANRNNQKADLEKKKLTSMEAAIKRTVDKLTTALEKKAEAEKLLLELEEDEVPQQSDMDKEGITEEERYMLRKIGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKVITGMKNIEEVHQIARMLEAESGGILVAIERVNKGYAIIVYRGKNYERPASLRPQTLLSKREAMKRSIEAQRRQSLKLHVLKLTQNIEALKSRLAKNEEMIHIQSPDIVDKQVPVTGLSDAARGTNYQPSLASPCTSEVKMNAFVDSEDVAEDTDPNCPNELPSDSSDTDHSSRQDIPSDSSFQYESKAAAMYDTTQPQHQSISSTKESKSMFNVNVDKKVFGSAVGEFVSTSFKEEVKIHFSETKSFSKPQEVDNKKEVSQVDSVKPQQELRSTRSRSEGMSPKKIQLSNRERLLLRKQALKMKKQPVLAVGRSNIVTGVAKNIKEHFKKYPLAIVNVKGRAKGTSVREVVFKLEQATGAVLVSQEPSKVILYRGWGAGEERASSNGNGTRDSRNIREHKELLAISPELFSAIRLECGLQSDNEMEVAS